Description

TBP-like 1 [Source:HGNC Symbol;Acc:HGNC:11589]

Synonyms

STUD, TLF, TLP, TRF2

INSDC coordinates

chromosome:GRCh38:CM000668.2:133952170:133990432:1

Transcripts



This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
TBPL1-001ENST000002372644228186 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5168P62380 Q7Z6T9 Q7Z6U0
Q7Z6U1 TBPL1-001
NM_004865
NP_004856
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
TBPL1-201ENST000006130341625186 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5168Q7Z6T9 Q7Z6U0 Q7Z6U1
TBPL1-201
NM_001253676
NP_001240605
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
TBPL1-003ENST00000416965991128 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q7Z6T9 Q7Z6U0 Q7Z6U1
TBPL1-003
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TBPL1-005ENST0000045771586545 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q7Z6T9 TBPL1-005 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TBPL1-002ENST00000367871808163 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q7Z6T9 Q7Z6U0 Q7Z6U1
Q7Z6U2 TBPL1-002
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TBPL1-004ENST0000036786962391 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q7Z6T9 Q7Z6U0 TBPL1-004
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TBPL1-007ENST00000477527634No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-TBPL1-007 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TBPL1-006ENST00000481694284No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
-TBPL1-006 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays