Description

sorting nexin 1 [Source:HGNC Symbol;Acc:HGNC:11172]

Synonyms

HsT17379, MGC8664, SNX1A, Vps5

Location
INSDC coordinates

chromosome:GRCh38:CM000677.2:64094123:64146090:1

Transcripts

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SNX1-003ENST000002618893373 bp557 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58371H0YKT3 Q13596 NM_001242933
NP_001229862
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SNX1-001ENST000005598441971 bp522 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32266H0YK42 Q13596 NM_003099
NP_003090
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SNX1-002ENST000005610261374 bp457 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32268H0YK42 Q13596 NM_148955
NP_683758
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SNX1-004ENST000005608291869 bp304 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YK42 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SNX1-010ENST00000560861850 bp70 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YKT3 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SNX1-009ENST00000558040774 bp128 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YK58 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SNX1-008ENST00000559061550 bp19 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SNX1-005ENST000003802858119 bp102 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3KPH4 -
SNX1-006ENST000005602601326 bp107 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YKD5 -
SNX1-007ENST00000559389753 bp111 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SNX1-012ENST00000559339101 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SNX1-014ENST00000559961712 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SNX1-013ENST00000559401408 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays