Description

sorting nexin 1 [Source:HGNC Symbol;Acc:HGNC:11172]

Synonyms

HsT17379, MGC8664, SNX1A, Vps5

Location

Chromosome 15: 64,094,123-64,146,090 forward strand.

GRCh38:CM000677.2

About this gene

This gene has 14 transcripts (splice variants), 80 orthologues, 4 paralogues, is a member of 3 Ensembl protein families and is associated with 54 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SNX1-003ENST000002618893373557aaENSP00000261889
 
Protein coding
CCDS58371Q13596 NM_001242933
NP_001229862
TSL:2GENCODE basic
SNX1-001ENST000005598441971522aaENSP00000453785
 
Protein coding
CCDS32266Q13596 NM_003099
NP_003090
TSL:1GENCODE basicAPPRIS P1
SNX1-002ENST000005610261374457aaENSP00000453567
 
Protein coding
CCDS32268Q13596 NM_148955
NP_683758
TSL:1GENCODE basic
SNX1-004ENST000005608291869304aaENSP00000452651
 
Protein coding
-H0YK42 -TSL:5GENCODE basic
SNX1-010ENST0000056086185070aaENSP00000452931
 
Protein coding
-H0YKT3 -CDS 5' incompleteTSL:3
SNX1-009ENST00000558040774128aaENSP00000452668
 
Protein coding
-H0YK58 -CDS 5' incompleteTSL:5
SNX1-008ENST0000055906155019aaENSP00000452652
 
Protein coding
-H0YK43 -CDS 3' incompleteTSL:5
SNX1-201ENST00000625244324107aaENSP00000486714
 
Protein coding
---TSL:5GENCODE basic
SNX1-005ENST000003802858119102aaENSP00000369638
 
Nonsense mediated decay
-J3KPH4 -TSL:1
SNX1-006ENST000005602601326107aaENSP00000452759
 
Nonsense mediated decay
-H0YKD5 -TSL:1
SNX1-007ENST00000559389753111aaENSP00000452852
 
Nonsense mediated decay
-H0YKL5 -CDS 5' incompleteTSL:5
SNX1-012ENST00000559339101No protein-
 
Processed transcript
---TSL:1
SNX1-014ENST00000559961712No protein-
 
Retained intron
---TSL:3
SNX1-013ENST00000559401408No protein-
 
Retained intron
---TSL:2

Gene-based displays