Description

heat shock transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:5225]

INSDC coordinates

chromosome:GRCh38:CM000668.2:122399546:122433119:1

About this gene

This gene has 3 transcripts (splice variants), 64 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 68 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HSF2-201ENST000004521942643518aaENSP00000400380
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47470Q03933 NM_001135564
NP_001129036
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HSF2-002ENST000003684552549536aaENSP00000357440
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5124Q03933 NM_004506
NP_004497
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

HSF2-001ENST00000465214642214aaENSP00000477405
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-V9GZ44 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays