Description

macrophage receptor with collagenous structure [Source:HGNC Symbol;Acc:HGNC:6895]

Synonyms

SCARA2

INSDC coordinates

chromosome:GRCh38:CM000664.2:118942166:118994660:1

About this gene

This gene has 3 transcripts (splice variants), 54 orthologues, 4 paralogues, is a member of 2 Ensembl protein families and is associated with 206 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MARCO-001ENST000003270971838520aaENSP00000318916
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2124Q4ZG40 Q9UEW3 NM_006770
NP_006761
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
MARCO-003ENST0000041248156964aaENSP00000409192
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JKT8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

MARCO-004ENST00000494979556No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays