Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LINC01275 ENSG00000237595

.

Description

long intergenic non-protein coding RNA 1275 [Source:HGNC Symbol;Acc:HGNC:50331]

Location

Chromosome 20: 50,154,414-50,166,261 reverse strand.

GRCh38:CM000682.2

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000768754.1	LINC01275-209	476	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000768759.1	LINC01275-214	1157	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000768761.1	LINC01275-216	1034	No protein	-	lncRNA		-	-
ENST00000658174.2	LINC01275-204	1032	No protein	-	lncRNA		-	-
ENST00000669734.3	LINC01275-205	1028	No protein	-	lncRNA		-	-
ENST00000768760.1	LINC01275-215	942	No protein	-	lncRNA		-	-
ENST00000691889.2	LINC01275-208	918	No protein	-	lncRNA		-	-
ENST00000652554.1	LINC01275-203	887	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000684980.2	LINC01275-207	763	No protein	-	lncRNA		-	-
ENST00000435301.2	LINC01275-201	733	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000768762.1	LINC01275-217	718	No protein	-	lncRNA		-	-
ENST00000670975.4	LINC01275-206	693	No protein	-	lncRNA		-	-
ENST00000768756.1	LINC01275-211	684	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000768757.1	LINC01275-212	578	No protein	-	lncRNA		-	-
ENST00000768758.1	LINC01275-213	570	No protein	-	lncRNA		-	-
ENST00000768755.1	LINC01275-210	404	No protein	-	lncRNA		-	-
ENST00000615503.1	LINC01275-202	403	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

.

Summary

.

.