Description

pancreatic and duodenal homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6107]

Synonyms

IDX-1, IPF1, MODY4, PDX-1, STF-1

Location
INSDC coordinates

chromosome:GRCh38:CM000675.2:27920020:27926231:1

About this gene

This gene has 1 transcript (splice variant) and is associated with 6 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PDX1-001ENST000003810332501283aaENSP00000370421
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9327P52945 NM_000209
NP_000200
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Stable ID

ENSG00000139515.5

Status

Current

Latest Version

ENSG00000139515.5

Release: 80 (current)

Assembly: GRCh38

Database: homo_sapiens_core_80_38

Associated archived IDs for this stable ID version

No associated IDs found

Gene-based displays