Description

major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]

Synonyms

CELIAC1, HLA-DQA

INSDC coordinates

scaffold:GRCh38:GL000255.2:3836385:3941310:1

Transcripts

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
HLA-DQA1-001ENST000003832511522254 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O19522 O19705 P01909
Q5Y7D2 Q67AA2 Q67AA3
Q67AA4 Q67AA8 Q67AB0
Q67AB1 Q67AB2 Q67AB3
Q67AC8 Q67AC9 Q67AD0
Q67AD1 Q67AD2 Q67AD3
Q67AD4 Q67AD7 Q67AD8
Q67AD9 Q67AE0 Q67AE1
Q67AE2 Q9UEF5
NM_002122
NP_002113
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-005ENST000003996781237254 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O19522 O19705 P01909
Q5Y7D2 Q67AA2 Q67AA3
Q67AA4 Q67AA8 Q67AB0
Q67AB1 Q67AB2 Q67AB3
Q67AC8 Q67AC9 Q67AD0
Q67AD1 Q67AD2 Q67AD3
Q67AD4 Q67AD7 Q67AD8
Q67AD9 Q67AE0 Q67AE1
Q67AE2 Q9UEF5
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-004ENST000003996751103254 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O19522 O19705 P01909
Q5Y7D2 Q67AA2 Q67AA3
Q67AA4 Q67AA8 Q67AB0
Q67AB1 Q67AB2 Q67AB3
Q67AC8 Q67AC9 Q67AD0
Q67AD1 Q67AD2 Q67AD3
Q67AD4 Q67AD7 Q67AD8
Q67AD9 Q67AE0 Q67AE1
Q67AE2 Q9UEF5
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-201ENST000005480141079254 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O19522 O19705 P01909
Q5Y7D2 Q67AA2 Q67AA3
Q67AA4 Q67AA8 Q67AB0
Q67AB1 Q67AB2 Q67AB3
Q67AC8 Q67AC9 Q67AD0
Q67AD1 Q67AD2 Q67AD3
Q67AD4 Q67AD7 Q67AD8
Q67AD9 Q67AE0 Q67AE1
Q67AE2 Q9UEF5
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Gene-based displays