Description

TRIM39-RPP21 readthrough [Source:HGNC Symbol;Acc:HGNC:38845]

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:30328907:30346858:1

About this gene

This gene has 2 transcripts (splice variants), 28 orthologues, 17 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TRIM39-RPP21-001ENST000006233851698503aaENSP00000485378
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A096LP39 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TRIM39-RPP21-201ENST000005135561567503aaENSP00000424048
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A096LP39 NM_001199119
NP_001186048
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays