Description

patched domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21345]

Synonyms

C6orf138, dJ402H5.2, FLJ41841

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:47878028:48068689:1

About this gene

This gene has 2 transcripts (splice variants), 93 orthologues, 6 paralogues, is a member of 1 Ensembl protein family and is associated with 26 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PTCHD4-002ENST000003394882850846aaENSP00000341914
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34473Q6ZW05 NM_001013732
NP_001013754
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

PTCHD4-001ENST000003987383232311aaENSP00000381722
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y3Q6 NM_207499
NP_997382
CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays