Description

interferon, alpha 17 [Source:HGNC Symbol;Acc:HGNC:5422]

Synonyms

IFN-alphaI, LEIF2C1

Location
INSDC coordinates

chromosome:GRCh38:CM000671.2:21206528:21228222:1

About this gene

This gene has 2 transcripts (splice variants), 189 orthologues, 16 paralogues, is a member of 1 Ensembl protein family and is associated with 34 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
IFNA17-001ENST00000413767980189aaENSP00000411940
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6500P01571 NM_021268
NP_067091
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
IFNA17-201ENST00000619448570189aaENSP00000482906
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WZU9 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays