Description

zinc finger protein 630 [Source:HGNC Symbol;Acc:HGNC:28855]

Synonyms

BC037316, dJ54B20.2, FLJ20573, MGC138344

Location
INSDC coordinates

chromosome:GRCh38:CM000685.2:47983356:48071658:1

About this gene

This gene has 8 transcripts (splice variants), 10 orthologues, 27 paralogues, is a member of 3 Ensembl protein families and is associated with 98 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ZNF630-201ENST000004424552829657aaENSP00000393163
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35237Q2M218 NM_001190255
NM_001282201
NP_001177184
NP_001269130
TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
ZNF630-002ENST000002760542791533aaENSP00000354683
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75971B2ZWH0 NM_001282202
NP_001269131
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZNF630-001ENST000004093242455657aaENSP00000386393
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35237Q2M218 NM_001037735
NP_001032824
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
ZNF630-202ENST000006164922220643aaENSP00000480858
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WXA8 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZNF630-003ENST00000428686988214aaENSP00000407278
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B2ZWG8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ZNF630-006ENST00000627643946200aaENSP00000485938
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ZNF630-005ENST0000042190354140aaENSP00000408054
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B2ZWG9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ZNF630-004ENST00000428463124588aaENSP00000400030
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8WCH7 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays