Description

major histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:HGNC:4931]

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:29941260:29945884:1

Transcripts



This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
HLA-A-001ENST000003966341868365 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34373A5PHP7 B1PKY1 B4DVC4
B6ECH2 B6VA02 B8XRE8
B8YCR7 C4PFZ1 C5IZQ3
C5IZR4 C5J027 C5J029
C6K4E3 C6K4G0 C6K4H0
C6K4H3 C6K4H8 C6K4I1
C6K4I6 C6K4J6 C8CH66
C8XTN7 C8XTN9 C8XTP7
C8XTP8 C9E1E7 C9E1E8
C9WEL1 C9WEL2 C9WEL3
D0AB29 D0EZJ9 D0EZK0
D0RAY3 D1MYY8 D3U442
D3U454 D3U484 D5FHG0
D5FHK5 D5FHM1 D5FHM3
D5FHM5 D5FHN7 D5FHQ9
D5FIG9 D5G2J2 D5M8E4
D5M8G1 D5M8G4 D6MJF7
D6MKY9 D6ML01 D6ML06
D6ML09 D6ML10 D6ML16
D6ML18 D6ML33 D6ML35
D6ML40 D6ML42 D6ML44
D6ML54 D6ML55 D6ML56
D6MLJ1 D6MLJ4 D6MLK2
D6MLL1 D6MLM4 D6MLN3
D6MLN9 D7NNM6 D7NNR5
D7NNS2 D7NNT3 D7NNT6
D7NNT9 D7NNU1 D7NP92
D7NP98 D7NPA3 D7NSP0
E0WBX1 E0WBX4 E0X9K2
E0YTI1 E0YTI8 E2D5K9
E2D5L9 E2D5M3 E2DH82
E3SG86 E5DCM0 E5DCM2
E5DCM4 E7BBA1 E7BY85
E7BY93 E8ZF52 E9LY00
E9LY02 E9LY14 F2VNC4
F2VND0 F2VNE0 F2VNF2
F2VNF7 F2VNG0 F2VNH0
F2VNH3 F2X5X9 F2X5Y0
F2X604 F4YU20 F4YU26
F6IQV7 F6KRM4 F6KRP1
F8R110 F8R119 F8R8I1
F8RHB9 F8RHC2 F8RHD1
G0WVA0 G0WVA6 G0ZDS9
G0ZMF4 G0ZMG3 G0ZMG4
G0ZMG9 G1DUW4 G1ENY5
G1EP05 G1EP18 G1EP19
G1EP50 G1EP55 G1EP71
G1EP78 G1EP88 G1EP95
G1EP96 G1EP98 G1EPB1
G3DR81 G9HW24 G9I2J6
H2BDP5 H2BE80 H6UV68
H6UV69 H6UV72 H9BQ78
I1W1L8 I2B2Z9 I3QHQ4
I3UI47 I3UI58 I6NS19
I6NS25 I6QU16 I6SJ64
J7F8L2 J7FNZ2 J7GM07
J9PWL3 J9PWV5 J9TNR8
J9UP83 K7P558 K7P562
K7P5B6 K7P5E0 K7P5U2
K7P5W6 K7P600 K7WPD7
K9L7Y8 K9LCM8 K9LDJ0
L0BVP5 L7PH13 L7PHU7
L7PHV2 M1F5P2 M1FWW6
M1FYE3 M1FYE6 M1KE04
M1SQT4 M4N6L9 M9P8Z4
M9PAA4 M9PAA7 M9PNR0
O19689 O78081 O78085
O78086 P04439 P13746
P16188 Q0MSI1 Q1M2R8
Q29840 Q2L4E7 Q5XLD1
Q861Q7 Q8HWS5 Q9MYA8
Q9TQ84 Q9UEX6 R4I3H2
R4I501 R9WYX8 S4TZE1
S4TZI2 S5CRT1 V9N2U2
V9N3G0
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
HLA-A-201ENST000003768091611365 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34373A5PHP7 B1PKY1 B4DVC4
B6ECH2 B6VA02 B8XRE8
B8YCR7 C4PFZ1 C5IZQ3
C5IZR4 C5J027 C5J029
C6K4E3 C6K4G0 C6K4H0
C6K4H3 C6K4H8 C6K4I1
C6K4I6 C6K4J6 C8CH66
C8XTN7 C8XTN9 C8XTP7
C8XTP8 C9E1E7 C9E1E8
C9WEL1 C9WEL2 C9WEL3
D0AB29 D0EZJ9 D0EZK0
D0RAY3 D1MYY8 D3U442
D3U454 D3U484 D5FHG0
D5FHK5 D5FHM1 D5FHM3
D5FHM5 D5FHN7 D5FHQ9
D5FIG9 D5G2J2 D5M8E4
D5M8G1 D5M8G4 D6MJF7
D6MKY9 D6ML01 D6ML06
D6ML09 D6ML10 D6ML16
D6ML18 D6ML33 D6ML35
D6ML40 D6ML42 D6ML44
D6ML54 D6ML55 D6ML56
D6MLJ1 D6MLJ4 D6MLK2
D6MLL1 D6MLM4 D6MLN3
D6MLN9 D7NNM6 D7NNR5
D7NNS2 D7NNT3 D7NNT6
D7NNT9 D7NNU1 D7NP92
D7NP98 D7NPA3 D7NSP0
E0WBX1 E0WBX4 E0X9K2
E0YTI1 E0YTI8 E2D5K9
E2D5L9 E2D5M3 E2DH82
E3SG86 E5DCM0 E5DCM2
E5DCM4 E7BBA1 E7BY85
E7BY93 E8ZF52 E9LY00
E9LY02 E9LY14 F2VNC4
F2VND0 F2VNE0 F2VNF2
F2VNF7 F2VNG0 F2VNH0
F2VNH3 F2X5X9 F2X5Y0
F2X604 F4YU20 F4YU26
F6IQV7 F6KRM4 F6KRP1
F8R110 F8R119 F8R8I1
F8RHB9 F8RHC2 F8RHD1
G0WVA0 G0WVA6 G0ZDS9
G0ZMF4 G0ZMG3 G0ZMG4
G0ZMG9 G1DUW4 G1ENY5
G1EP05 G1EP18 G1EP19
G1EP50 G1EP55 G1EP71
G1EP78 G1EP88 G1EP95
G1EP96 G1EP98 G1EPB1
G3DR81 G9HW24 G9I2J6
H2BDP5 H2BE80 H6UV68
H6UV69 H6UV72 H9BQ78
I1W1L8 I2B2Z9 I3QHQ4
I3UI47 I3UI58 I6NS19
I6NS25 I6QU16 I6SJ64
J7F8L2 J7FNZ2 J7GM07
J9PWL3 J9PWV5 J9TNR8
J9UP83 K7P558 K7P562
K7P5B6 K7P5E0 K7P5U2
K7P5W6 K7P600 K7WPD7
K9L7Y8 K9LCM8 K9LDJ0
L0BVP5 L7PH13 L7PHU7
L7PHV2 M1F5P2 M1FWW6
M1FYE3 M1FYE6 M1KE04
M1SQT4 M4N6L9 M9P8Z4
M9PAA4 M9PAA7 M9PNR0
O19689 O78081 O78085
O78086 P04439 P13746
P16188 Q0MSI1 Q1M2R8
Q29840 Q2L4E7 Q5XLD1
Q861Q7 Q8HWS5 Q9MYA8
Q9TQ84 Q9UEX6 R4I3H2
R4I501 R9WYX8 S4TZE1
S4TZI2 S5CRT1 V9N2U2
V9N3G0
NM_002116
NP_002107
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
HLA-A-002ENST000003768061854371 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A5PHP7 B6ECH2 B6VA02
B8XRE8 B8YCR7 C4PFZ1
C5IZQ3 C5IZR4 C5J027
C5J029 C6K4E3 C6K4G0
C6K4H0 C6K4H3 C6K4H8
C6K4I1 C6K4I6 C6K4J6
C8CH66 C8XTN7 C8XTN9
C8XTP7 C8XTP8 C9E1E7
C9E1E8 C9WEL1 C9WEL2
C9WEL3 D0AB29 D0EZJ9
D0EZK0 D0RAY3 D1MYY8
D3U442 D3U454 D3U484
D5FHG0 D5FHK5 D5FHM1
D5FHM3 D5FHM5 D5FHN7
D5FHQ9 D5FIG9 D5G2J2
D5M8E4 D5M8G1 D5M8G4
D6MJF7 D6MKY9 D6ML01
D6ML06 D6ML09 D6ML10
D6ML16 D6ML18 D6ML33
D6ML35 D6ML40 D6ML42
D6ML44 D6ML54 D6ML55
D6ML56 D6MLJ1 D6MLJ4
D6MLK2 D6MLL1 D6MLM4
D6MLN3 D6MLN9 D7NNM6
D7NNR5 D7NNS2 D7NNT3
D7NNT6 D7NNT9 D7NNU1
D7NP92 D7NP98 D7NPA3
D7NSP0 E0WBX1 E0WBX4
E0X9K2 E0YTI1 E0YTI8
E2D5K9 E2D5L9 E2D5M3
E2DH82 E3SG86 E5DCM0
E5DCM2 E5DCM4 E7BBA1
E7BY85 E7BY93 E8ZF52
E9LY00 E9LY02 E9LY14
F2VNC4 F2VND0 F2VNE0
F2VNF2 F2VNF7 F2VNG0
F2VNH0 F2VNH3 F2X5X9
F2X5Y0 F2X604 F4YU20
F4YU26 F6IQV7 F6KRM4
F6KRP1 F8R110 F8R119
F8R8I1 F8RHB9 F8RHC2
F8RHD1 G0WVA0 G0WVA6
G0ZDS9 G0ZMF4 G0ZMG3
G0ZMG4 G0ZMG9 G1DUW4
G1ENY5 G1EP05 G1EP18
G1EP19 G1EP50 G1EP55
G1EP71 G1EP78 G1EP88
G1EP95 G1EP96 G1EP98
G1EPB1 G3DR81 G9HW24
G9I2J6 H2BDP5 H2BE80
H6UV68 H6UV69 H6UV72
H9BQ78 I1W1L8 I2B2Z9
I3QHQ4 I3UI47 I3UI58
I6NS19 I6NS25 I6QU16
I6SJ64 J7F8L2 J7FNZ2
J7GM07 J9PWL3 J9PWV5
J9TNR8 J9UP83 K7P558
K7P562 K7P5B6 K7P5E0
K7P5U2 K7P5W6 K7P600
K7WPD7 K9L7Y8 K9LCM8
K9LDJ0 L0BVP5 L7PH13
L7PHU7 L7PHV2 M1F5P2
M1FWW6 M1FYE3 M1FYE6
M1KE04 M1SQT4 M4N6L9
M9P8Z4 M9PAA4 M9PAA7
M9PNR0 O78081 O78085
O78086 Q0MSI1 Q1M2R8
Q2L4E7 Q5SRN5 Q5XLD1
Q861Q7 Q8HWS5 Q9MYA8
Q9TQ84 Q9UEX6 R4I3H2
R4I501 R9WYX8 S4TZE1
S4TZI2 S5CRT1 V9N2U2
V9N3G0
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-A-202ENST000006201681584356 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0ZXY8 A7MAP4 B4DVC4
G1DUW4 O19689 O78086
Q0MSI1 Q2L4E7
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-A-003ENST000003768021334299 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A5PHP7 B6ECH2 B6VA02
B8XRE8 B8YCR7 C4PFZ1
C5IZQ3 C5IZR4 C5J027
C5J029 C6K4E3 C6K4G0
C6K4H0 C6K4H3 C6K4H8
C6K4I1 C6K4I6 C6K4J6
C8CH66 C8XTN7 C8XTN9
C8XTP7 C8XTP8 C9E1E7
C9E1E8 C9WEL1 C9WEL2
C9WEL3 D0AB29 D0EZJ9
D0EZK0 D0RAY3 D1MYY8
D3U442 D3U454 D3U484
D5FHG0 D5FHK5 D5FHM1
D5FHM3 D5FHM5 D5FHN7
D5FHQ9 D5FIG9 D5G2J2
D5M8E4 D5M8G1 D5M8G4
D6MJF7 D6MKY9 D6ML01
D6ML06 D6ML09 D6ML10
D6ML16 D6ML18 D6ML33
D6ML35 D6ML40 D6ML42
D6ML44 D6ML54 D6ML55
D6ML56 D6MLJ1 D6MLJ4
D6MLK2 D6MLL1 D6MLM4
D6MLN3 D6MLN9 D7NNM6
D7NNR5 D7NNS2 D7NNT3
D7NNT6 D7NNT9 D7NNU1
D7NP92 D7NP98 D7NPA3
D7NSP0 E0WBX1 E0WBX4
E0X9K2 E0YTI1 E0YTI8
E2D5K9 E2D5L9 E2D5M3
E2DH82 E3SG86 E5DCM0
E5DCM2 E5DCM4 E7BBA1
E7BY85 E7BY93 E8ZF52
E9LY00 E9LY02 E9LY14
F2VNC4 F2VND0 F2VNE0
F2VNF2 F2VNF7 F2VNG0
F2VNH0 F2VNH3 F2X5X9
F2X5Y0 F2X604 F4YU20
F4YU26 F6KRM4 F6KRP1
F8R110 F8R119 F8R8I1
F8RHB9 F8RHC2 F8RHD1
G0WVA0 G0WVA6 G0ZDS9
G0ZMF4 G0ZMG3 G0ZMG4
G0ZMG9 G1DUW4 G1ENY5
G1EP05 G1EP18 G1EP19
G1EP50 G1EP55 G1EP71
G1EP78 G1EP88 G1EP95
G1EP96 G1EP98 G1EPB1
G3DR81 G9HW24 G9I2J6
H2BDP5 H2BE80 H6UV68
H6UV69 H6UV72 H9BQ78
I1W1L8 I2B2Z9 I3QHQ4
I3UI47 I3UI58 I6NS19
I6NS25 I6QU16 I6SJ64
J7F8L2 J7FNZ2 J7GM07
J9PWL3 J9PWV5 J9TNR8
J9UP83 K7P558 K7P562
K7P5B6 K7P5E0 K7P5U2
K7P5W6 K7P600 K7WPD7
K9L7Y8 K9LCM8 K9LDJ0
L0BVP5 L7PH13 L7PHU7
L7PHV2 M1F5P2 M1FWW6
M1FYE3 M1FYE6 M1KE04
M1SQT4 M4N6L9 M9P8Z4
M9PAA4 M9PAA7 M9PNR0
O78081 O78085 O78086
Q0MSI1 Q1M2R8 Q2L4E7
Q5SRN7 Q5XLD1 Q861Q7
Q8HWS5 Q9MYA8 Q9TQ84
Q9UEX6 R4I3H2 R4I501
R9WYX8 S4TZE1 S4TZI2
S5CRT1 V9N2U2 V9N3G0
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-A-004ENST000004960811786No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-A-005ENST000004951831766No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-A-007ENST000004619031352No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-A-006ENST000004793201334No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays