Description

solute carrier organic anion transporter family, member 1B7 (non-functional) [Source:HGNC Symbol;Acc:HGNC:32934]

Synonyms

LST3, SLC21A21

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:21015696:21092745:1

About this gene

This gene has 3 transcripts (splice variants), 55 orthologues, 13 paralogues, is a member of 2 Ensembl protein families and is associated with 138 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SLCO1B7-001ENST000004215931923640aaENSP00000394168
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44843G3V0H7 NM_001009562
NP_001009562
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SLCO1B7-003ENST0000054591650699aaENSP00000439857
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YFQ8 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SLCO1B7-002ENST00000541784558No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays