Description

diencephalon/mesencephalon homeobox 1 [Source:HGNC Symbol;Acc:HGNC:19026]

Synonyms

OTX3, PAXB

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:46506996:46514226:1

About this gene

This gene has 2 transcripts (splice variants), 62 orthologues, 12 paralogues, is a member of 1 Ensembl protein family and is associated with 98 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
DMBX1-001ENST000003600322880377aaENSP00000353132
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS536Q8NFW5 NM_172225
NP_757379
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

DMBX1-201ENST000003719562882382aaENSP00000361024
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8NFW5 NM_147192
NP_671725
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays