Description

protein tyrosine phosphatase, non-receptor type 1 [Source:HGNC Symbol;Acc:HGNC:9642]

Synonyms

PTP1B

Location
INSDC coordinates

chromosome:GRCh38:CM000682.2:50510321:50585241:1

About this gene

This gene has 2 transcripts (splice variants), 65 orthologues, 12 paralogues, is a member of 1 Ensembl protein family and is associated with 55 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PTPN1-001ENST000003716214008435aaENSP00000360683
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13430A8K3M3 P18031 NM_002827
NP_002818
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

PTPN1-201ENST000005417133469362aaENSP00000437732
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS63309B4DSN5 NM_001278618
NP_001265547
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays