Description

zinc finger protein 107 [Source:HGNC Symbol;Acc:HGNC:12887]

Synonyms

smap-7, ZFD25, ZNF588

Location
INSDC coordinates

chromosome:GRCh38:CM000669.2:64666083:64711582:1

Transcripts



This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
ZNF107-001ENST000003953916094783 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5527A0A024R5Y9 C9JSF9 Q9H3U2
Q9UII5
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZNF107-201ENST000004236275773783 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5527A0A024R5Y9 C9JSF9 Q9H3U2
Q9UII5
NM_016220
NP_057304
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZNF107-203ENST000006208275685852 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75605A0A024R5Y9 C9JSF9 Q9H3U2
NM_001282359
NP_001269288
TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
ZNF107-202ENST000006136905589820 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75606Q9H3U2 NM_001282360
NP_001269289
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
ZNF107-002ENST000003449305174783 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5527A0A024R5Y9 C9JSF9 Q9H3U2
Q9UII5
NM_001013746
NP_001013768
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZNF107-003ENST00000360117106191 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JSF9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays