Description

serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 [Source:HGNC Symbol;Acc:HGNC:8723]

Synonyms

PAI3, PCI, PLANH3, PROCI

Location
INSDC coordinates

chromosome:GRCh38:CM000676.2:94561442:94593120:1

Transcripts

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
SERPINA5-201ENST000003295972337406 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9928A0A024R6N9 G3V264 G3V265
G3V2M1 G3V3F5 G3V3Y3
G3V482 G3V4B4 P05154
NM_000624
NP_000615
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINA5-003ENST000005548662211406 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9928A0A024R6N9 G3V264 G3V265
G3V2M1 G3V3F5 G3V3Y3
G3V482 G3V4B4 P05154
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINA5-008ENST000005542762210406 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9928A0A024R6N9 G3V264 G3V265
G3V2M1 G3V3F5 G3V3Y3
G3V482 G3V4B4 P05154
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINA5-002ENST000005537802071406 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9928A0A024R6N9 G3V264 G3V265
G3V2M1 G3V3F5 G3V3Y3
G3V482 G3V4B4 P05154
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINA5-012ENST000005547601113301 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V264 G3V265 G3V2M1
G3V3F5 G3V3Y3 G3V482
G3V4B4 G3V5Q9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERPINA5-014ENST00000556775829231 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V264 G3V265 G3V2M1
G3V3F5 G3V3Y3 G3V482
G3V4B4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERPINA5-010ENST00000555681618144 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V3F5 G3V3Y3 G3V482
G3V4B4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERPINA5-016ENST00000557598607157 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V265 G3V3F5 G3V3Y3
G3V482 G3V4B4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERPINA5-001ENST00000554220586172 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V264 G3V265 G3V3F5
G3V3Y3 G3V482 G3V4B4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERPINA5-013ENST0000055351157490 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V3F5 G3V3Y3 G3V4B4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERPINA5-011ENST0000055463353386 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V3Y3 G3V4B4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERPINA5-015ENST0000055606446224 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V3Y3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SERPINA5-009ENST000005567301463No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays