Description

transmembrane protease, serine 11A [Source:HGNC Symbol;Acc:HGNC:27954]

Synonyms

ECRG1

Location
INSDC coordinates

chromosome:GRCh38:CM000666.2:67909385:67964140:1

About this gene

This gene has 4 transcripts (splice variants), 55 orthologues, 16 paralogues, is a member of 1 Ensembl protein family and is associated with 119 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TMPRSS11A-001ENST000003348303054421aaENSP00000334611
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3519A0A0A0MR82 NM_182606
NP_872412
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
TMPRSS11A-002ENST000005080483247418aaENSP00000426911
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q6ZMR5 NM_001114387
NP_001107859
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
TMPRSS11A-201ENST000003961881350390aaENSP00000379491
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B5MDI9 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TMPRSS11A-003ENST000005135361190385aaENSP00000427621
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YAL9 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays