Description

keratin 79 [Source:HGNC Symbol;Acc:HGNC:28930]

Synonyms

K6L, KRT6L

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:52821410:52834295:1

About this gene

This gene has 3 transcripts (splice variants), 81 orthologues, 23 paralogues, is a member of 2 Ensembl protein families and is associated with 125 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
KRT79-001ENST000003305532068535aaENSP00000328358
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8839Q5XKE5 NM_175834
NP_787028
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KRT79-003ENST00000549255761119aaENSP00000449159
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YID6 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

KRT79-002ENST000005464531542No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays