Description

class II, major histocompatibility complex, transactivator [Source:HGNC Symbol;Acc:HGNC:7067]

Synonyms

C2TA, MHC2TA, NLRA

Location

Chromosome 16: 10,877,198-10,932,281 forward strand.

GRCh38:CM000678.2

About this gene

This gene has 14 transcripts (splice variants), 58 orthologues, 3 paralogues, is a member of 1 Ensembl protein family and is associated with 1 phenotype.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CIITA-001ENST00000324288119521130aaENSP00000316328
 
Protein coding
CCDS10544A0A0B4J1S1 NM_000246
NP_000237
TSL:1GENCODE basicAPPRIS P3
CIITA-203ENST0000061832746571131aaENSP00000485010
 
Protein coding
CCDS73826A0A087X2I7 NM_001286402
NP_001273331
TSL:2GENCODE basicAPPRIS ALT2
CIITA-002ENST000003818352344546aaENSP00000371257
 
Protein coding
CCDS66943P33076 NM_001286403
NP_001273332
TSL:1GENCODE basic
CIITA-201ENST000006115873363884aaENSP00000483487
 
Protein coding
-A0A087X0L5 -TSL:5GENCODE basic
CIITA-202ENST000006182072844353aaENSP00000484761
 
Protein coding
-Q29704 -TSL:5GENCODE basic
CIITA-008ENST00000576601626177aaENSP00000459608
 
Protein coding
-I3L2E5 -CDS 3' incompleteTSL:4
CIITA-006ENST000005711861041172aaENSP00000459829
 
Nonsense mediated decay
-I3L2P7 -TSL:5
CIITA-005ENST000005373801062No protein-
 
Processed transcript
---TSL:1
CIITA-012ENST00000571545567No protein-
 
Processed transcript
---TSL:3
CIITA-009ENST00000572665560No protein-
 
Processed transcript
---TSL:5
CIITA-003ENST000005705465342No protein-
 
Retained intron
---TSL:2
CIITA-004ENST000005733093366No protein-
 
Retained intron
---TSL:1
CIITA-010ENST00000575513516No protein-
 
Retained intron
---TSL:2
CIITA-007ENST00000571190479No protein-
 
Retained intron
---TSL:NA

Gene-based displays