Description

von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]

Synonyms

FLJ22215, VWA-1, WARP

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:1434861:1442882:1

About this gene

This gene has 4 transcripts (splice variants), 63 orthologues, 13 paralogues, is a member of 2 Ensembl protein families and is associated with 35 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
VWA1-001ENST000004769934511445aaENSP00000417185
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27Q6PCB0 NM_022834
NP_073745
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

VWA1-002ENST00000338660214764aaENSP00000423404
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28Q6PCB0 NM_199121
NP_954572
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
VWA1-003ENST00000495558819167aaENSP00000463643
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QLP3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

VWA1-004ENST00000471398458148aaENSP00000464343
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QRR0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays