Description

forkhead box L1 [Source:HGNC Symbol;Acc:HGNC:3817]

Synonyms

FKH6, FKHL11, FREAC7

Location
INSDC coordinates

chromosome:GRCh38:CM000678.2:86576368:86582160:1

About this gene

This gene has 2 transcripts (splice variants), 43 orthologues, 23 paralogues, is a member of 1 Ensembl protein family and is associated with 62 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FOXL1-001ENST000003202413655345aaENSP00000326272
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10959Q12952 NM_005250
NP_005241
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

FOXL1-002ENST00000593625592114aaENSP00000472376
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0R279 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays