Description

poly(A) binding protein, cytoplasmic 5 [Source:HGNC Symbol;Acc:HGNC:13629]

Synonyms

PABP5

Location
INSDC coordinates

chromosome:GRCh38:CM000685.2:91434595:91438584:1

About this gene

This gene has 2 transcripts (splice variants), 62 orthologues, 14 paralogues, is a member of 1 Ensembl protein family and is associated with 119 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PABPC5-001ENST000003126003221382aaENSP00000308012
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14460Q96DU9 NM_080832
NP_543022
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PABPC5-002ENST000003731051262218aaENSP00000362197
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5JQF3 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays