Description

cystatin SN [Source:HGNC Symbol;Acc:HGNC:2473]

Location
INSDC coordinates

chromosome:GRCh38:CM000682.2:23747553:23751268:1

About this gene

This gene has 2 transcripts (splice variants), 55 orthologues, 7 paralogues, is a member of 1 Ensembl protein family and is associated with 56 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CST1-001ENST00000304749760141aaENSP00000305731
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13160P01037 NM_001898
NP_001889
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CST1-002ENST00000398402655141aaENSP00000381439
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13160P01037 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays