Description

LIM and senescent cell antigen-like domains 1 [Source:HGNC Symbol;Acc:HGNC:6616]

Synonyms

PINCH, PINCH1

Location

Chromosome 2: 108,534,355-108,687,246 forward strand.

GRCh38:CM000664.2

About this gene

This gene has 15 transcripts (splice variants), 65 orthologues, 14 paralogues, is a member of 2 Ensembl protein families and is associated with 31 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
LIMS1-201ENST000005445474461337aaENSP00000437912
 
Protein coding
CCDS54382P48059 NM_001193483
NP_001180412
TSL:1GENCODE basicAPPRIS ALT1
LIMS1-001ENST000003933104392325aaENSP00000376987
 
Protein coding
CCDS2078P48059 NM_001193488
NP_001180417
TSL:1GENCODE basicAPPRIS P3
LIMS1-014ENST000003380451876387aaENSP00000337598
 
Protein coding
CCDS54385P48059 NM_001193485
NP_001180414
TSL:1GENCODE basic
LIMS1-003ENST000004094411627362aaENSP00000387264
 
Protein coding
CCDS54384P48059 NM_001193484
NP_001180413
TSL:1GENCODE basicAPPRIS ALT1
LIMS1-006ENST000004100931526329aaENSP00000386926
 
Protein coding
CCDS54383P48059 NM_001193482
NP_001180411
TSL:1GENCODE basic
LIMS1-002ENST000003323451235325aaENSP00000331775
 
Protein coding
CCDS2078P48059 NM_004987
NP_004978
TSL:1GENCODE basicAPPRIS P3
LIMS1-011ENST0000043427477955aaENSP00000410751
 
Protein coding
-F8WB59 -TSL:3
LIMS1-012ENST00000542845727209aaENSP00000446121
 
Protein coding
-P48059 -CDS 5' incompleteTSL:1
LIMS1-007ENST00000428064637177aaENSP00000390862
 
Protein coding
-C9JF46 -CDS 3' incompleteTSL:2
LIMS1-005ENST00000414829439117aaENSP00000399267
 
Protein coding
-F8WC86 -TSL:1GENCODE basic
LIMS1-004ENST000004227971544100aaENSP00000402322
 
Nonsense mediated decay
-F8WE10 -TSL:1
LIMS1-009ENST00000462817566No protein-
 
Processed transcript
---TSL:4
LIMS1-008ENST00000449684492No protein-
 
Processed transcript
---TSL:5
LIMS1-010ENST00000474038679No protein-
 
Retained intron
---TSL:1
LIMS1-013ENST00000496653626No protein-
 
Retained intron
---TSL:4

Gene-based displays