Description

platelet-activating factor receptor [Source:HGNC Symbol;Acc:HGNC:9582]

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:28147166:28193936:1

About this gene

This gene has 3 transcripts (splice variants), 61 orthologues, 16 paralogues, is a member of 1 Ensembl protein family and is associated with 65 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PTAFR-001ENST000003738574491342aaENSP00000362965
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS318P25105 NM_000952
NM_001164723
NP_000943
NP_001158195
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

PTAFR-201ENST000005398964191342aaENSP00000442658
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS318P25105 NM_001164721
NM_001164722
NP_001158193
NP_001158194
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

PTAFR-002ENST000003053921539342aaENSP00000301974
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS318P25105 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays