Description

R-spondin 1 [Source:HGNC Symbol;Acc:HGNC:21679]

Synonyms

FLJ40906, RSPONDIN

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:37611350:37634923:1

About this gene

This gene has 4 transcripts (splice variants), 62 orthologues, 3 paralogues, is a member of 1 Ensembl protein family and is associated with 2 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RSPO1-003ENST000003565452621263aaENSP00000348944
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41304Q2MKA7 NM_001242908
NP_001229837
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

RSPO1-004ENST000006124512463200aaENSP00000479832
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55590Q2MKA7 NM_001242910
NP_001229839
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RSPO1-001ENST000006154592331236aaENSP00000481178
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55591Q2MKA7 NM_001242909
NP_001229838
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RSPO1-002ENST000004010682320263aaENSP00000383846
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41304Q2MKA7 NM_001038633
NP_001033722
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays