Description

low density lipoprotein receptor-related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]

Synonyms

LRP-DIT, LRPDIT

INSDC coordinates

chromosome:GRCh38:CM000664.2:140231423:142131701:1

Transcripts

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
LRP1B-001ENST00000389484165354599 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2182Q4ZFV5 Q4ZG53 Q53QM8
Q53QP5 Q53RA0 Q53RG4
Q53RL0 Q53S26 Q53S73
Q53S76 Q53TB8 Q580W7
Q8WY26 Q8WY27 Q9NZR2
NM_018557
NP_061027
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
LRP1B-201ENST00000618808132194406 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q4ZFV5 Q53QM8 Q53QP5
Q53RA0 Q53S26 Q53S73
Q53S76 Q53TB8
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LRP1B-003ENST000004379773810798 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8WY26 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

LRP1B-002ENST000004347942621782 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7ERG8 Q4ZG53 Q580W7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

LRP1B-005ENST00000442974839280 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

LRP1B-004ENST00000486364514No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays