Description

lactate dehydrogenase A-like 6A [Source:HGNC Symbol;Acc:HGNC:28335]

Synonyms

LDH6A, MGC23940

Location
INSDC coordinates

chromosome:GRCh38:CM000673.2:18455824:18479600:1

About this gene

This gene has 3 transcripts (splice variants), 47 orthologues, 5 paralogues, is a member of 1 Ensembl protein family and is associated with 49 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
LDHAL6A-002ENST000002807062526332aaENSP00000280706
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7841Q6ZMR3 NM_144972
NP_659409
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

LDHAL6A-001ENST000003962131716332aaENSP00000379516
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7841Q6ZMR3 NM_001144071
NP_001137543
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

LDHAL6A-201ENST000006153551042233aaENSP00000478764
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WUM2 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays