Description

NK6 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:26328]

Synonyms

FLJ25169

Location
INSDC coordinates

chromosome:GRCh38:CM000670.2:41645178:41650669:1

About this gene

This gene has 2 transcripts (splice variants), 54 orthologues, 17 paralogues, is a member of 2 Ensembl protein families and is associated with 16 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NKX6-3-002ENST000005241151683135aaENSP00000429553
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6118A6NJ46 NM_152568
NP_689781
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NKX6-3-001ENST000005186991352265aaENSP00000428361
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A6NJ46 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays