Description

gastrulation brain homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4185]

INSDC coordinates

chromosome:GRCh38:CM000669.2:151148589:151174745:1

About this gene

This gene has 2 transcripts (splice variants), 39 orthologues, 19 paralogues, is a member of 1 Ensembl protein family and is associated with 37 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GBX1-001ENST000002975371092363aaENSP00000297537
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43682Q14549 NM_001098834
NP_001092304
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

GBX1-002ENST00000475831556No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:4

Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays