Description

claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:42733093:42740254:1

About this gene

This gene has 3 transcripts (splice variants), 52 orthologues, 12 paralogues, is a member of 1 Ensembl protein family and is associated with 3 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CLDN19-201ENST000005397493517218aaENSP00000443229
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53306Q8N6F1 NM_001185117
NP_001172046
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CLDN19-001ENST000002963872859224aaENSP00000296387
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS471Q8N6F1 NM_148960
NP_683763
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CLDN19-002ENST000003725391586211aaENSP00000361617
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44125Q8N6F1 NM_001123395
NP_001116867
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays