Description

potassium inwardly-rectifying channel, subfamily J, member 16 [Source:HGNC Symbol;Acc:HGNC:6262]

Synonyms

BIR9, Kir5.1

Location
INSDC coordinates

chromosome:GRCh38:CM000679.2:70053429:70135608:1

Transcripts

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
KCNJ16-204ENST000006152444190418 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11687K7EKJ4 K7ELL5 Q9NPI9
NM_001270422
NM_001291624
NM_001291625
NP_001257351
NP_001278553
NP_001278554
TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KCNJ16-201ENST000002839364062418 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11687K7EKJ4 K7ELL5 Q9NPI9
NM_018658
NP_061128
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KCNJ16-001ENST000005855584014453 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS74141K7EJR9 K7EKJ4 K7ELL5
NM_001291622
NM_001291623
NM_170742
NP_001278551
NP_001278552
NP_733938
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
KCNJ16-202ENST000003926704009418 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11687K7EKJ4 K7ELL5 Q9NPI9
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KCNJ16-203ENST000003926713981418 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11687K7EKJ4 K7ELL5 Q9NPI9
NM_170741
NP_733937
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KCNJ16-002ENST000005893773684418 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11687K7EKJ4 K7ELL5 Q9NPI9
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
KCNJ16-006ENST000005864621897457 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKJ4 K7ELL5 K7EPW9
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
KCNJ16-009ENST0000058769858964 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKJ4 K7ELL5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

KCNJ16-010ENST0000058789258235 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKJ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

KCNJ16-008ENST0000059189156935 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EKJ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

KCNJ16-005ENST000005881121698No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays