Description

protein tyrosine phosphatase, receptor type, O [Source:HGNC Symbol;Acc:HGNC:9678]

Synonyms

GLEPP1, NPHS6, PTP-oc, PTP-U2, PTPU2

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:15322397:15597399:1

Transcripts

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PTPRO-001ENST000002811715301 bp1216 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8675B4DS16 Q16827 NM_030667
NP_109592
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPRO-002ENST000003489625061 bp1188 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8674B4DS16 Q16827 NM_002848
NP_002839
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPRO-006ENST000004455374062 bp405 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44837B4DS16 Q16827 NM_030671
NP_109596
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPRO-007ENST000005442443978 bp377 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53754B4DS16 Q16827 NM_030670
NP_109595
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPRO-004ENST000004429213030 bp405 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44837B4DS16 Q16827 NM_030669
NP_109594
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPRO-005ENST000005425572946 bp377 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53754B4DS16 Q16827 NM_030668
NP_109593
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPRO-003ENST000005438862070 bp597 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q16827 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PTPRO-012ENST00000535322472 bp116 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YH60 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PTPRO-011ENST00000535311533 bp88 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PTPRO-010ENST00000544706905 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PTPRO-008ENST00000545023512 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PTPRO-009ENST00000538907580 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays