Description

cadherin 22, type 2 [Source:HGNC Symbol;Acc:HGNC:13251]

Synonyms

C20orf25, dJ998H6.1

Location
INSDC coordinates

chromosome:GRCh38:CM000682.2:46173733:46308498:1

About this gene

This gene has 3 transcripts (splice variants), 53 orthologues, 12 paralogues, is a member of 1 Ensembl protein family and is associated with 182 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CDH22-201ENST000005379093902828aaENSP00000437790
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13395Q9UJ99 NM_021248
NP_067071
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CDH22-001ENST000003722623661828aaENSP00000361336
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13395Q9UJ99 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CDH22-002ENST000004744381640No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays