Description

NK6 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19321]

Synonyms

GTX, NKX6.1, NKX6B

INSDC coordinates

chromosome:GRCh38:CM000672.2:132783179:132786052:1

About this gene

This gene has 2 transcripts (splice variants), 28 orthologues, 17 paralogues, is a member of 1 Ensembl protein family and is associated with 31 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NKX6-2-001ENST000003685922673277aaENSP00000357581
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7670Q9C056 NM_177400
NP_796374
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

NKX6-2-002ENST00000441365475No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays