Description

zinc finger protein 92 [Source:HGNC Symbol;Acc:HGNC:13168]

Synonyms

HPF12, TF12

Location
INSDC coordinates

chromosome:GRCh38:CM000669.2:65373799:65401135:1

About this gene

This gene has 5 transcripts (splice variants), 36 orthologues, 43 paralogues, is a member of 1 Ensembl protein family and is associated with 84 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ZNF92-001ENST000003287473210586aaENSP00000332595
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34646Q03936 V9HVY7 NM_152626
NP_689839
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
ZNF92-201ENST000003575123124554aaENSP00000350113
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75608Q03936 NM_001287532
NP_001274461
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
ZNF92-002ENST000004503022957517aaENSP00000396126
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47596Q03936 NM_007139
NP_009070
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZNF92-004ENST000004315042947510aaENSP00000400495
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75609C9IZS8 NM_001287533
NM_001287534
NP_001274462
NP_001274463
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZNF92-003ENST00000488849582No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays