Description

vasoactive intestinal peptide [Source:HGNC Symbol;Acc:HGNC:12693]

INSDC coordinates

chromosome:GRCh38:CM000668.2:152750798:152759765:1

About this gene

This gene has 3 transcripts (splice variants), 63 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 1 phenotype.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
VIP-001ENST000003672441584170aaENSP00000356213
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5240P01282 NM_003381
NP_003372
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
VIP-002ENST000003672431581169aaENSP00000356212
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5241P01282 NM_194435
NP_919416
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
VIP-003ENST000004313661257119aaENSP00000410356
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0Y763 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays