Description

UDP glycosyltransferase 3 family, polypeptide A1 [Source:HGNC Symbol;Acc:HGNC:26625]

Synonyms

FLJ34658

Location
INSDC coordinates

chromosome:GRCh38:CM000667.2:35951010:36001028:1

About this gene

This gene has 7 transcripts (splice variants), 31 orthologues, 22 paralogues, is a member of 2 Ensembl protein families and is associated with 168 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
UGT3A1-001ENST000002742785122523aaENSP00000274278
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3913A8K444 Q6NUS8 NM_152404
NP_689617
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

UGT3A1-006ENST000006257983097252aaENSP00000487376
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54841A0A024R085 NM_001171873
NP_001165344
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UGT3A1-201ENST000003338111114252aaENSP00000328033
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54841A0A024R085 Q6NUS8 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UGT3A1-003ENST000005031891902436aaENSP00000427079
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7Z8Q8 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UGT3A1-002ENST000005071131650402aaENSP00000426100
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PD17 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UGT3A1-004ENST00000515801500257aaENSP00000427630
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RHV6 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

UGT3A1-005ENST00000513233556No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays