Description

UDP glycosyltransferase 3 family, polypeptide A1 [Source:HGNC Symbol;Acc:HGNC:26625]

Synonyms

FLJ34658

Location
INSDC coordinates

chromosome:GRCh38:CM000667.2:35951010:36001028:1

About this gene

This gene has 7 transcripts (splice variants), 88 orthologues, 22 paralogues, is a member of 2 Ensembl protein families and is associated with 167 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
UGT3A1-001ENST000002742785122523aaENSP00000274278
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3913A8K444 Q6NUS8 NM_152404
NP_689617
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
UGT3A1-006ENST000006257983097252aaENSP00000487376
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54841A0A024R085 NM_001171873
NP_001165344
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UGT3A1-201ENST000003338111114252aaENSP00000328033
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54841A0A024R085 Q6NUS8 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UGT3A1-003ENST000005031891902436aaENSP00000427079
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7Z8Q8 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UGT3A1-002ENST000005071131650402aaENSP00000426100
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PD17 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
UGT3A1-004ENST00000515801500257aaENSP00000427630
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RHV6 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

UGT3A1-005ENST00000513233556No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays