Description

RAR-related orphan receptor C [Source:HGNC Symbol;Acc:HGNC:10260]

Synonyms

NR1F3, RORG, RZRG, TOR

INSDC coordinates

chromosome:GRCh38:CM000663.2:151806071:151831872:1

About this gene

This gene has 3 transcripts (splice variants), 55 orthologues, 18 paralogues, is a member of 1 Ensembl protein family and is associated with 103 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RORC-002ENST000003567283050497aaENSP00000349164
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30856F1D8P6 P51449 NM_001001523
NP_001001523
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

RORC-001ENST000003182472180518aaENSP00000327025
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS1004P51449 Q6I9R9 NM_005060
NP_005051
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

RORC-003ENST000004807194141No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays