Description

netrin 5 [Source:HGNC Symbol;Acc:HGNC:25208]

Location
INSDC coordinates

chromosome:GRCh38:CM000681.2:48661407:48673081:1

About this gene

This gene has 3 transcripts (splice variants), 55 orthologues, 6 paralogues, is a member of 2 Ensembl protein families and is associated with 46 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NTN5-001ENST000002702351836489aaENSP00000270235
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS33068Q8WTR8 NM_145807
NP_665806
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
NTN5-003ENST0000059684470175aaENSP00000469490
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0QXZ9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

NTN5-002ENST000006004682426No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays