Description

SRY (sex determining region Y)-box 5 [Source:HGNC Symbol;Acc:HGNC:11201]

Synonyms

L-SOX5, MGC35153

Location
INSDC coordinates

chromosome:GRCh38:CM000674.2:23529500:23951032:1

Transcripts

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SOX5-003ENST000005461366975 bp750 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44844F5GWL1 P35711 T2CYZ2
NM_152989
NP_694534
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-002ENST000004516044261 bp763 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8699F5GWL1 P35711 T2CYZ2
NM_006940
NP_008871
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-201ENST000003813813991 bp642 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58216F5GWL1 P35711 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-007ENST000005459212589 bp753 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58217F5GWL1 P35711 T2CYZ2
NM_001261415
NP_001248344
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-009ENST000005415362365 bp642 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58216F5GWL1 P35711 NM_001261414
NP_001248343
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-001ENST000003960071379 bp377 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS41761P35711 NM_178010
NP_821078
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-008ENST000005373932769 bp728 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H0I3 T2CZM2 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-016ENST00000541847758 bp241 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GWL1 F5H876 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-004ENST00000441133638 bp128 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V0H1 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX5-010ENST00000538083617 bp144 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GWL1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SOX5-006ENST000003672061816 bp509 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5GWL1 I3L0A5 -
SOX5-011ENST00000536850606 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX5-014ENST00000535530576 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX5-015ENST00000536629570 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX5-012ENST00000542241376 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX5-013ENST00000536911855 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays