Description

gap junction protein, alpha 9, 59kDa [Source:HGNC Symbol;Acc:HGNC:19155]

Synonyms

CX58, CX59, GJA10

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:38874451:38881587:1

About this gene

This gene has 2 transcripts (splice variants), 49 orthologues, 10 paralogues, is a member of 1 Ensembl protein family and is associated with 70 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GJA9-001ENST000003607861901515aaENSP00000354020
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS432P57773 -TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

GJA9-002ENST000003577711799515aaENSP00000350415
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS432P57773 NM_030772
NP_110399
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays