Description

low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]

Synonyms

LDLCQ2

Location
INSDC coordinates

chromosome:GRCh38:CM000681.2:11089362:11133816:1

Transcripts

This gene has 14 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
LDLR-003ENST000005585183617 bp860 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12254E1B4S5 P01130 Q6LCH2
NM_000527
NP_000518
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LDLR-002ENST000005580133144 bp858 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58651E1B4S5 P01130 Q6LCH2
NM_001195798
NP_001182727
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LDLR-001ENST000005359152768 bp819 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56085E1B4S5 P01130 Q6LCH2
NM_001195799
NP_001182728
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LDLR-006ENST000005457072429 bp682 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56083E1B4S5 P01130 Q6LCH2
NM_001195803
NP_001182732
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LDLR-007ENST000004557272333 bp692 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56084E1B4S5 P01130 Q6LCH2
NM_001195800
NP_001182729
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LDLR-004ENST000002524445337 bp945 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E1B4S5 Q6LCH2 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
LDLR-012ENST000005579332941 bp948 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E1B4S5 H0YMD1 Q6LCH2
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LDLR-011ENST00000560467928 bp309 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E1B4S5 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
LDLR-015ENST00000559340605 bp170 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
LDLR-014ENST00000560628535 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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LDLR-009ENST000005579581881 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LDLR-008ENST00000560502509 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LDLR-010ENST00000558528456 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LDLR-013ENST00000560173389 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays