Description

transient receptor potential cation channel, subfamily V, member 5 [Source:HGNC Symbol;Acc:HGNC:3145]

Synonyms

CaT2, ECAC1

INSDC coordinates

chromosome:GRCh38:CM000669.2:142908101:142933808:1

About this gene

This gene has 3 transcripts (splice variants), 75 orthologues, 6 paralogues, is a member of 1 Ensembl protein family and is associated with 264 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TRPV5-001ENST000002653102952729aaENSP00000265310
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5875A0A0A6YY98 NM_019841
NP_062815
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TRPV5-002ENST000004426232120381aaENSP00000406572
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9NQA5 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRPV5-003ENST000004393042025674aaENSP00000406361
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C2J6 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays