Description

SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]

Synonyms

bA375E1.3, PDEF

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:34537802:34556333:1

Transcripts



This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
SPDEF-001ENST000003740371895335 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4794O95238 NM_012391
NP_036523
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI2APPRIS candidate principal isoform (longest CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
SPDEF-201ENST000005444251866319 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59013O95238 NM_001252294
NP_001239223
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website

Gene-based displays