Description

serpin peptidase inhibitor, clade B (ovalbumin), member 6 [Source:HGNC Symbol;Acc:HGNC:8950]

Synonyms

CAP, DFNB91, PI6, PTI

Location
INSDC coordinates

chromosome:GRCh38:CM000668.2:2948159:2972165:1

About this gene

This gene has 8 transcripts (splice variants), 124 orthologues, 13 paralogues, is a member of 1 Ensembl protein family and is associated with 3 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SERPINB6-002ENST000003805203265376aaENSP00000369891
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4479A0A024QZX3 P35237 NP_001284628
NP_001284629
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINB6-202ENST000006167222047380aaENSP00000481398
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75386A0A024QZX5 NM_001195291
NP_001182220
NP_001284628
NP_001284629
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SERPINB6-003ENST000003356861604376aaENSP00000338358
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4479A0A024QZX3 P35237 NM_001271824
NM_004568
NP_001258753
NP_001284628
NP_001284629
NP_004559
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINB6-201ENST000006124211570395aaENSP00000484343
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75387A0A087X1N8 NM_001271823
NP_001258752
NP_001284628
NP_001284629
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SERPINB6-001ENST000003805241495376aaENSP00000369896
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4479A0A024QZX3 P35237 NM_001271825
NP_001258754
NP_001284628
NP_001284629
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINB6-006ENST000003805461375376aaENSP00000369919
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4479A0A024QZX3 P35237 NP_001284628
NP_001284629
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINB6-004ENST000003805291370376aaENSP00000369901
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4479A0A024QZX3 P35237 NM_001271822
NP_001258751
NP_001284628
NP_001284629
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SERPINB6-005ENST000003805391338376aaENSP00000369912
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4479A0A024QZX3 P35237 NP_001284628
NP_001284629
TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website

Gene-based displays