Description

ataxin 3-like [Source:HGNC Symbol;Acc:HGNC:24173]

Synonyms

MJDL

Location
INSDC coordinates

chromosome:GRCh38:CM000685.2:13318236:13319952:1

About this gene

This gene has 2 transcripts (splice variants), 66 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 80 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ATXN3L-001ENST000003806221717355aaENSP00000369996
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48080Q9H3M9 NM_001135995
NP_001129467
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

ATXN3L-201ENST00000622204837162aaENSP00000479386
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WVE5 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays