Description

tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]

INSDC coordinates

chromosome:GRCh38:CM000663.2:175067858:175148066:1

About this gene

This gene has 3 transcripts (splice variants), 61 orthologues, 12 paralogues, is a member of 1 Ensembl protein family and is associated with 447 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TNN-001ENST0000023946250081299aaENSP00000239462
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30943A0A0A6YY94 Q9UQP3 NM_022093
NP_071376
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TNN-201ENST0000062108642341122aaENSP00000480895
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WXC4 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TNN-202ENST0000062287037191122aaENSP00000481259
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WXT0 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays