Description

homeobox B1 [Source:HGNC Symbol;Acc:HGNC:5111]

Synonyms

HOX2, HOX2I

Location
INSDC coordinates

chromosome:GRCh38:CM000679.2:48528526:48530997:1

About this gene

This gene has 2 transcripts (splice variants), 62 orthologues, 19 paralogues, is a member of 1 Ensembl protein family and is associated with 3 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HOXB1-001ENST000002391742020301aaENSP00000355140
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32675P14653 NM_002144
NP_002135
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

HOXB1-002ENST000005770921414232aaENSP00000459066
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P14653 -TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays